msm-internal {msm} | R Documentation |
Auxiliary R functions used in the msm package. These are not meant to be called by the user
lik.msm(params, allinits, misc, subject, time, state, tostate, fromto, qvector, evector, covvec, constrvec, misccovvec, miscconstrvec, baseconstrvec, basemiscconstrvec, initprobs, nstates, nintens, nintenseffs, nmisc, nmisceffs, nobs, npts, ncovs, ncoveffs, nmisccovs, nmisccoveffs, covmatch, death, tunit, exacttimes, fixedpars, plabs) getobs.msm(sim, obstimes, death, tunit) observed.msm(x, times) msm.process.covs(covariates, data, constraint, nobs, nmatrix) msm.form.output(matrix, nstates, nmatrix, nmatrixeffs, npars, ncovs, constrvec, baseconstrvec, fixedpars, fixed, covlabels, params, covmat, foundse, params.offset) msm.check.qmatrix(qmatrix) msm.check.ematrix(ematrix, qmatrix) msm.check.consistency(qmatrix, misc, fromto=F, subject=NULL, state, tostate=NULL, time, death=FALSE, exacttimes=FALSE, tunit=NULL) msm.check.state(nstates, state, fromto=FALSE, tostate=NULL) msm.check.model(state, subject, qmatrix, fromto=NULL, tostate=NULL) msm.check.times(time, subject) msm.check.tunit(fromto, time, subject, timelag, tunit) qematrix.msm(x, covariates="mean", which="intens", sojourn) qematrix.diagse.msm(x, covariates="mean", which="intens", sojourn, ni, nieffs, ivector, nc, constrvec, baseconstrvec, covlabels, covmeans, trsum) qematrix.diagse.formstr(nir, inds, cur.i, ni, nc, coefs, offset, trsum) expsum(inds, coefs) expitsum(inds, coefs) qratio.se.msm(x, ind1, ind2, covariates="mean") transient.msm(x) absorbing.msm(x)
C. H. Jackson chris.jackson@imperial.ac.uk